Package: shinyExprPortal 1.2.1.9000

Rafael Henkin

shinyExprPortal: A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data

Enables deploying configuration file-based 'shiny' apps with minimal programming for interactive exploration and analysis showcase of molecular expression data. For exploration, supports visualization of correlations between rows of an expression matrix and a table of observations, such as clinical measures, and comparison of changes in expression over time. For showcase, enables visualizing the results of differential expression from package such as 'limma', co-expression modules from 'WGCNA' and lower dimensional projections.

Authors:Rafael Henkin [cre, aut, cph]

shinyExprPortal_1.2.1.9000.tar.gz
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shinyExprPortal_1.2.1.9000.tgz(r-4.4-any)shinyExprPortal_1.2.1.9000.tgz(r-4.3-any)
shinyExprPortal_1.2.1.9000.tar.gz(r-4.5-noble)shinyExprPortal_1.2.1.9000.tar.gz(r-4.4-noble)
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shinyExprPortal.pdf |shinyExprPortal.html✨
shinyExprPortal/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/c4tb/shinyexprportal/issues

On CRAN:

bioinformaticsdata-analysistranscriptomics

6 exports 4 stars 1.77 score 87 dependencies 8 scripts 332 downloads

Last updated 2 months agofrom:b8a1bf982d. Checks:OK: 7. Indexed: yes.

Exports:create_config_templatecreate_config_wizardcreate_examplecreate_module_templaterun_appshow_available_modules

Dependencies:assertthatbase64encbslibcachemclicolorspacecommonmarkconfigcpp11crayoncrosstalkdata.tabledigestdplyrDTevaluatefansifarverfastclusterfastmapfontawesomefsgenericsggdendroggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuviheatmaprisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrmarkdownMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigplyrpromisespurrrqvalueR6rappdirsRColorBrewerRcppRcppArmadilloRcppGSLRcppParallelRcppZigguratreshape2Rfastrlangrmarkdownsassscalesshinyshinyhelpersourcetoolsstringistringrtibbletidyrtidyselecttinytexutf8vctrsvegawidgetviridisLitewithrxfunxtableyaml